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Department of Pharmacology

 
Read more at: Digging deeper into pain: an ethological behavior assay correlating well-being in mice with human pain experience

Digging deeper into pain: an ethological behavior assay correlating well-being in mice with human pain experience

The pressing need for safer, more efficacious analgesics is felt worldwide. Pre-clinical tests in animal models of painful conditions represent one of the earliest checkpoints novel therapeutics must negotiate before consideration for human use. Traditionally, the pain status of laboratory animals has been inferred from evoked nociceptive assays which measure their responses to noxious stimuli.


Read more at: SpyMask enables combinatorial assembly of bispecific binders

SpyMask enables combinatorial assembly of bispecific binders

<jats:title>Abstract</jats:title><jats:p>Bispecific antibodies are a successful and expanding therapeutic class. Standard approaches to generate bispecifics are complicated by the need for disulfide reduction/oxidation or specialized formats. Here we present SpyMask, a modular approach to bispecifics using SpyTag/SpyCatcher spontaneous amidation. Two SpyTag-fused antigen-binding modules can be precisely conjugated onto DoubleCatcher, a tandem SpyCatcher where the second SpyCatcher is protease-activatable.


Read more at: Binding kinetics drive G protein subtype selectivity at the β1-adrenergic receptor

Binding kinetics drive G protein subtype selectivity at the β1-adrenergic receptor

G protein-coupled receptors (GPCRs) bind to different G protein α-subtypes with varying degrees of selectivity. The mechanism by which GPCRs achieve this selectivity is still unclear. Using 13C methyl methionine and 19F NMR, we investigate the agonist-bound active state of β1AR and its ternary complexes with different G proteins in solution. We find the receptor in the ternary complexes adopts very similar conformations.


Read more at: HSP70 binds to specific non-coding RNA and regulates human RNA polymerase III.

HSP70 binds to specific non-coding RNA and regulates human RNA polymerase III.

Molecular chaperones are critical for protein homeostasis and are implicated in several human pathologies such as neurodegeneration and cancer. While the binding of chaperones to nascent and misfolded proteins has been studied in great detail, the direct interaction between chaperones and RNA has not been systematically investigated. Here, we provide the evidence for widespread interaction between chaperones and RNA in human cells. We show that the major chaperone heat shock protein 70 (HSP70) binds to non-coding RNA transcribed by RNA polymerase III (RNA Pol III) such as tRNA and 5S rRNA.


Read more at: Binding kinetics drive G protein subtype selectivity at the β1-adrenergic receptor

Binding kinetics drive G protein subtype selectivity at the β1-adrenergic receptor

<jats:title>Abstract</jats:title><jats:p>G protein-coupled receptors (GPCRs) bind to different G protein α-subtypes with varying degrees of selectivity. The mechanism by which GPCRs achieve this selectivity is still unclear. Using <jats:sup>13</jats:sup>C methyl methionine and <jats:sup>19</jats:sup>F NMR, we investigate the agonist-bound active state of β<jats:sub>1</jats:sub>AR and its ternary complexes with different G proteins in solution. We find the receptor in the ternary complexes adopts very similar conformations.


Read more at: Tandem-repeat proteins conformational mechanics are optimized to facilitate functional interactions and complexations.

Tandem-repeat proteins conformational mechanics are optimized to facilitate functional interactions and complexations.

The architectures of tandem-repeat proteins are distinct from those of globular proteins. Individual modules, each comprising small structural motifs of 20-40 residues, are arrayed in a quasi one-dimensional fashion to form striking, elongated, horseshoe-like, and superhelical architectures, stabilized solely by short-range interaction. The spring-like shapes of repeat arrays point to elastic modes of action, and these proteins function as adapter molecules or 'hubs,' propagating signals within multi-subunit assemblies in diverse biological contexts.


Read more at: Computational Workflow for Refining AlphaFold Models in Drug Design Using Kinetic and Thermodynamic Binding Calculations: A Case Study for the Unresolved Inactive Human Adenosine A3 Receptor.

Computational Workflow for Refining AlphaFold Models in Drug Design Using Kinetic and Thermodynamic Binding Calculations: A Case Study for the Unresolved Inactive Human Adenosine A3 Receptor.

A structure-based drug design pipeline that considers both thermodynamic and kinetic binding data of ligands against a receptor will enable the computational design of improved drug molecules. For unresolved GPCR-ligand complexes, a workflow that can apply both thermodynamic and kinetic binding data in combination with alpha-fold (AF)-derived or other homology models and experimentally resolved binding modes of relevant ligands in GPCR-homologs needs to be tested.


Read more at: Exploring bias in platelet P2Y1 signalling: Host defence versus haemostasis.

Exploring bias in platelet P2Y1 signalling: Host defence versus haemostasis.

Platelets are necessary for maintaining haemostasis. Separately, platelets are important for the propagation of inflammation during the host immune response against infection. The activation of platelets also causes inappropriate inflammation in various disease pathologies, often in the absence of changes to haemostasis. The separate functions of platelets during inflammation compared with haemostasis are therefore varied and this will be reflected in distinct pathways of activation.


Read more at: Consensus tetratricopeptide repeat proteins are complex superhelical nanosprings

Consensus tetratricopeptide repeat proteins are complex superhelical nanosprings

Tandem-repeat proteins comprise small secondary structure motifs that stack to form one-dimensional arrays with distinctive mechanical properties that are proposed to direct their cellular functions. Here, we use single-molecule optical tweezers to study the folding of consensus-designed tetratricopeptide repeats (CTPRs) — superhelical arrays of short helix-turn-helix motifs. We find that CTPRs display a spring-like mechanical response in which individual repeats undergo rapid equilibrium fluctuations between folded and unfolded conformations.


Read more at: Human labour pain is influenced by the voltage-gated potassium channel K<sub>V</sub>6.4 subunit

Human labour pain is influenced by the voltage-gated potassium channel K<sub>V</sub>6.4 subunit

<h4>A bstract </h4> We sought genetic effects on labour pain by studying healthy women who did not request analgesia during their first delivery. Extensive sensory and psychometric testing were normal in these women, except for significantly higher cuff-pressure pain. We found an excess of heterozygotes carrying the rare allele of SNP rs140124801 in KCNG4 . The rare variant K V 6.4-Met419 exerts a dominant negative effect and cannot modulate the voltage-dependence of K V 2.1 inactivation because it fails to traffic to the plasma membrane.